Education
B.Sc. in Agriculture
Patuakhali Science and Technology University · 2020-2025
Final grade 3.547/4.00 across 180 credits, with a foundation in agricultural science, soil management, plant biotechnology, and research design.
Open to scholarship & research opportunities
Partho
Sarker Dhrubo
Graduate researcher in soil & molecular biology working across coastal agriculture, silicon stress mitigation, and bioinformatics-driven discovery.
15+
Bioinformatics tools
IELTS 7
English proficiency
4
Papers & manuscripts
// SPEAKING @ BDJOBS x PSTU
Journey to Career — 2025
$ run docking
→ -8.5 kcal/mol
// 01 — ABOUT
At the intersection of biology, data, and the field.
I'm a B.Sc. Agriculture graduate from Patuakhali Science and Technology University, working at the meeting point of soil science, molecular biology, and bioinformatics. My CV now spans BAS-USDA funded coastal soil research, silicon-mediated crop stress mitigation, protein characterization, publications, and student research leadership.
Molecular biology
In-silico structural and functional protein characterization through modelling, docking, MSA, and sequence analysis.
Agricultural science
Coastal saline soil, nutrient management, silicon mitigation, pot experiments, and trait analysis.
Community & leadership
Founding President of PSTU Research Society and Co-founder of Bioinformatics Club, PSTU.
// 02 — CREDENTIALS
Education, work & awards
A compact view of the updated CV: academic record, funded research experience, scholarships, and language readiness.
Research Assistant
BAS-USDA PSTU CC Project
Department of Soil Science · Department of Genetics & Plant Breeding
Worked on saline soil and nutrient management in coastal unfavorable ecosystems, including sample collection, treatment setup, silicon mitigation, trait analysis, and data analysis.
Awards
Scholarships & case competition
Education Board · BRAC · Qamarun Agro Farm
Received Education Board, BRAC merit, and primary school scholarships; winner with Team Sabuj Pathik at the 4th Youth Business Conference business case study competition.
Language
English proficiency
IELTS 7.0 · C1
Listening 8.0, Reading 7.0, Speaking 6.5, and Writing 6.0, supporting international research communication and scholarship applications.
// 03 — SELECTED WORK
Research & projects
Updated from the latest CV: coastal soil management, BRRI rice genotype field work, RTC-funded bioinformatics training, and agri-tech concept development.
Bioinformatics · Molecular Docking
Decoding structural stability & ligand binding of a hypothetical protein from Fusarium graminearum
First in-depth computational analysis of YP_001249320.1 — combining homology modelling, 250 ns MD simulations, and docking with eight flavonoid derivatives. Identified MOLPORT-003-935-831 as a top-performing binder (-8.5 kcal/mol).
11th International Plant Tissue Culture & Biotechnology Conference · University of Dhaka · Jan 2026
AgriTech · Concept
কৃষিবন্ধু App — Transforming agriculture, empowering farmers
A concept platform aggregating weather advisories, market prices, pest diagnostics, and treatment guidance directly into farmers' hands — bridging extension services with mobile technology.
Project poster · Faculty of Agriculture, PSTU
Soil Science · Coastal Agriculture
Silicon mitigation for saline and heavy-metal stressed crop systems
Research experience under BAS-USDA PSTU CC and Bangladesh Academy of Sciences-supported work, focusing on saline soil, nutrient management, treatment application, trait analysis, and crop stress resilience.
Department of Soil Science · Department of Genetics & Plant Breeding · PSTU
// 04 — PUBLICATIONS
Papers & manuscripts
Published and under-review work across silicon-mediated stress tolerance, coastal agriculture, and computational protein characterization.
Published
Remediation of lead toxicity by exogenous application of silicon in rice
Bangladesh Journal of Agriculture, 50(1), 1-19 · DOI: 10.3329/bjagri.v50i1.82829
Under review
Silicon supplementation boosts salt resilience in coastal traditional rice
Heliyon · Manuscript HELIYON-D-25-11148
Under review
In silico structural and functional characterization of an uncharacterized protein from Arabidopsis thaliana involved in phosphate transport
Journal of Genetic Engineering and Biotechnology · Manuscript JGEBIO-D-26-00036
Under review
Comparative effectiveness of basal and foliar silicon application on wheat productivity in coastal saline-prone soils
Journal of Soil Science and Plant Nutrition · EMID: 6e17009eea1db52b
Poster
Decoding structural stability and ligand binding mechanism of a hypothetical protein from Fusarium graminearum
11th International PTC&B Conference, University of Dhaka · 24-26 January 2026
Molecular Docking•
Phylogenetics•
AAS Operation•
Plant Biotechnology•
AutoDock Vina•
Tissue Culture•
TSS Estimation•
Agri Innovation•
Ascorbic Acid Profiling•
BLASTp · MEGA12•
Molecular Docking•
Phylogenetics•
AAS Operation•
Plant Biotechnology•
AutoDock Vina•
Tissue Culture•
TSS Estimation•
Agri Innovation•
Ascorbic Acid Profiling•
BLASTp · MEGA12•
// 03 — TOOLBOX
Skills & instruments
A working vocabulary spanning computational pipelines and wet-lab protocols.
Bioinformatics
17 toolsNCBI-CDExPASyInterProiTOL v7.0PSIPREDBLASTpMEGA12SOPMAtrRosettaClustal OmegaMolProbitySWISS-MODELSubcellular localizationRamachandran plotMultiple sequence alignmentStructural modellingMolecular docking
Lab & Field
17 toolsFluorescence chlorophyllVitamin C analysisMoisture contentRoot scanningUV/VIS spectrometerAAS operationTSS estimation (chili)Ascorbic acid profilingDose optimizationPot experimentsResearch designSample analysisTreatment setupTrait analysisSilicon mitigationChemical analysisData analysis
Professional
10 toolsBasic R programmingZoteroEndNoteGraphic designPhotoshopAI toolsPesticide application technologyYouth wellbeing facilitationBusiness case studyIELTS 7.0
// 04 — JOURNEY
Leadership & milestones
Mar 2025 — Dec 2025
Founding President, PSTU Research Society
Led research culture programs, including the Journey to Career seminar with bdjobs and supervised hands-on student research pathways.
Jul 2025 — current
Co-founder, Bioinformatics Club, PSTU
Helping run Bioinformatics for Beginners and workshops connecting agricultural and fisheries research with bioinformatics tools.
26 Aug 2025
Journey to Career × bdjobs
Flagship program in collaboration with Bangladesh's largest job-seeking platform, helping students prepare for the workforce.
2024
Qamarun Agro Farm — 4th Youth Business Conference
Winner with Team Sabuj Pathik - Green Travelers in a business case study competition.
2026
Poster presenter — 11th PTC&B Conference, DU
Presented bioinformatics research on molecular docking & dynamics simulations at the University of Dhaka.
// 05 — IN THE LAB & FIELD
Where science meets the soil
From pot experiments and root scanning to chlorophyll fluorometry in the paddy — a glimpse into the hands-on work behind the data.
Greenhouse · Treatment setup
Pot experiment sampling
Field · Pocket PEA
Chlorophyll fluorometry
Lab · Image analysis
Root scanning
Net-house · Phenotyping
Rice trait monitoring
Research walk · PSTU
Field briefing with mentors
Community · PSTU
Research Society gathering
// 05 — MOMENTS
From the field & stage
Field trials, certificates, research posters, lab workflows, workshops, and leadership moments — continuously scrolling archive.
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// 07 — CURRICULUM VITAE
Take home the full story
Research experience, publications, projects, awards, language score, and leadership work — packaged into the latest four-page CV for scholarship reviewers, supervisors, and collaborators.
Education
B.Sc. Agriculture · CGPA 3.547
Focus
Soil & Molecular Biology
Output
Published + under-review papers
Role
Founding President · PSTURS
4 pages · Last updated June 2026
CURRICULUM VITAE
Partho Sarker Dhrubo
Bioinformatics · Plant Biotechnology
Education
Research
Projects
Skills
Leadership
partho.dhrubo@pstu.ac.bdp. 1 / 2
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// 06 — LET'S CONNECT
Have a research idea, a collaboration, or just curious?
I'm always open to conversations about bioinformatics, agricultural innovation, or building things that help researchers and farmers.